Master data

Title: Data quality for federated medical data lakes
Subtitle:
Abstract:

Purpose
Medical research requires biological material and data collected through biobanks in reliable processes with quality assurance. Medical studies based on data with unknown or questionable quality are useless or even dangerous, as evidenced by recent examples of withdrawn studies. Medical data sets consist of highly sensitive personal data, which has to be protected carefully and is available for research only after the approval of ethics committees. The purpose of this research is to propose an architecture to support researchers to efficiently and effectively identify relevant collections of material and data with documented quality for their research projects while observing strict privacy rules.

Design/methodology/approach
Following a design science approach, this paper develops a conceptual model for capturing and relating metadata of medical data in biobanks to support medical research.

Findings
This study describes the landscape of biobanks as federated medical data lakes such as the collections of samples and their annotations in the European federation of biobanks (Biobanking and Biomolecular Resources Research Infrastructure – European Research Infrastructure Consortium, BBMRI-ERIC) and develops a conceptual model capturing schema information with quality annotation. This paper discusses the quality dimensions for data sets for medical research in-depth and proposes representations of both the metadata and data quality documentation with the aim to support researchers to effectively and efficiently identify suitable data sets for medical studies.


Keywords: Biobank; Metadata; Data quality; Data lake; Privacy; LOINC; Metadata and ontologies
Publication type: Article in journal (Authorship)
Publication date: 21.09.2021 (Print)
Published by: International Journal of Web Information Systems
International Journal of Web Information Systems
to publication
 ( Emerald Group Publishing Limited; )
Title of the series: -
Volume number: Vol. 17
Issue: 5
First publication: Yes
Version: -
Page: pp. 407 - 426

Versionen

Keine Version vorhanden
Publication date: 08.07.2021
ISBN (e-book): -
eISSN: 1744-0084
DOI: http://dx.doi.org/10.1108/IJWIS-03-2021-0026
Homepage: https://www.emerald.com/insight/1744-0084.htm
Open access
  • Available online (open access)
Publication date: 21.09.2021
ISBN: -
ISSN: -
Homepage: -

Assignment

Organisation Address
Fakultät für Technische Wissenschaften
 
Institut für Informatik-Systeme
Universitätsstr. 65-67
A-9020 Klagenfurt
Austria
  -993503
   kerstin.smounig@aau.at
https://www.aau.at/isys/
To organisation
Universitätsstr. 65-67
AT - A-9020  Klagenfurt

Categorisation

Subject areas
  • 102015 - Information systems
  • 102020 - Medical informatics
Research Cluster No research Research Cluster selected
Citation index
  • Emerging Sources Citation Index (ESCI)
Information about the citation index: Master Journal List
Peer reviewed
  • Yes
Publication focus
  • Science to Science (Quality indicator: II)
Classification raster of the assigned organisational units:
working groups
  • Information and Communication Systems (ICS)

Cooperations

No partner organisations selected

Articles of the publication

No related publications